Description
chromatin modifying protein 1A
Synonyms
CHMP1, Vps46A, KIAA0047
Location
Chromosome 16: 89,644,431-89,657,845 reverse strand.
VEGA68:CM000678.2
About this gene
This gene has 11 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CHMP1A-001 | OTTHUMT00000404581.1 | 2483 | 196aa | OTTHUMP00000241410 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45552 | Q9HD42 | |
| CHMP1A-002 | OTTHUMT00000404583.1 | 2295 | 132aa | OTTHUMP00000241411 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F5H875 | |
| CHMP1A-011 | OTTHUMT00000404586.1 | 803 | 187aa | OTTHUMP00000241412 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F8VVT7 | |
| CHMP1A-003 | OTTHUMT00000404584.1 | 1404 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CHMP1A-009 | OTTHUMT00000404587.1 | 1003 | 181aa | OTTHUMP00000241413 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F8VUA2 | |
| CHMP1A-010 | OTTHUMT00000404590.1 | 653 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CHMP1A-004 | OTTHUMT00000404582.1 | 2007 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHMP1A-008 | OTTHUMT00000404585.1 | 812 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHMP1A-006 | OTTHUMT00000404588.1 | 689 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHMP1A-007 | OTTHUMT00000404589.1 | 566 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHMP1A-005 | OTTHUMT00000404591.1 | 533 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
