Description
integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
Synonyms
CD49e
Location
Chromosome 12: 54,395,261-54,419,460 reverse strand.
VEGA68:CM000674.2
About this gene
This gene has 13 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| ITGA5-001 | OTTHUMT00000406174.2 | 4444 | 1049aa | OTTHUMP00000242260 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS8880 | P08648 | |
| ITGA5-012 | OTTHUMT00000406175.1 | 757 | 119aa | OTTHUMP00000242261 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YIV7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ITGA5-002 | OTTHUMT00000406183.1 | 1240 | 137aa | OTTHUMP00000242262 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | B4E3F4 | |
| ITGA5-003 | OTTHUMT00000406184.1 | 1013 | 120aa | OTTHUMP00000242263 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| ITGA5-005 | OTTHUMT00000406185.1 | 547 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| ITGA5-004 | OTTHUMT00000406173.2 | 4996 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA5-013 | OTTHUMT00000406178.1 | 1333 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA5-011 | OTTHUMT00000406177.1 | 588 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA5-007 | OTTHUMT00000406181.1 | 582 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA5-009 | OTTHUMT00000406179.1 | 568 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA5-006 | OTTHUMT00000406182.1 | 536 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA5-010 | OTTHUMT00000406176.1 | 505 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| ITGA5-008 | OTTHUMT00000406180.1 | 354 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
