Description
retinitis pigmentosa GTPase regulator interacting protein 1
Synonyms
LCA6, RGI1, CORD13
Location
Chromosome 14: 21,287,939-21,351,301 forward strand.
VEGA68:CM000676.2
About this gene
This gene has 13 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
RPGRIP1-001 | OTTHUMT00000410258.1 | 3940 | 1286aa | OTTHUMP00000244344 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45080 | Q96KN7 | |
RPGRIP1-011 | OTTHUMT00000410257.1 | 3870 | 1248aa | OTTHUMP00000244343 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V3F7 | |
RPGRIP1-010 | OTTHUMT00000410256.1 | 2955 | 943aa | OTTHUMP00000244342 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V236 | |
RPGRIP1-009 | OTTHUMT00000410264.1 | 2371 | 761aa | OTTHUMP00000244348 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V3I7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
RPGRIP1-002 | OTTHUMT00000410260.1 | 2004 | 612aa | OTTHUMP00000244345 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
RPGRIP1-006 | OTTHUMT00000410261.2 | 566 | 166aa | OTTHUMP00000244346 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V577 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
RPGRIP1-008 | OTTHUMT00000410265.2 | 429 | 143aa | OTTHUMP00000244349 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YIY1 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
RPGRIP1-012 | OTTHUMT00000410268.2 | 402 | 134aa | OTTHUMP00000244351 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YJK6 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
RPGRIP1-004 | OTTHUMT00000410263.1 | 2373 | 26aa | OTTHUMP00000244347 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
RPGRIP1-003 | OTTHUMT00000410266.1 | 2139 | 59aa | OTTHUMP00000244350 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
RPGRIP1-007 | OTTHUMT00000410262.1 | 585 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
RPGRIP1-005 | OTTHUMT00000410267.1 | 2875 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
RPGRIP1-013 | OTTHUMT00000410259.1 | 571 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |