Description
retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
Synonyms
MDT1, SDR7C1, ARSDR1
Location
Chromosome 14: 67,676,801-67,695,814 reverse strand.
VEGA68:CM000676.2
About this gene
This gene has 13 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RDH11-001 | OTTHUMT00000412257.3 | 2588 | 318aa | OTTHUMP00000245403 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32104 | A0A0S2Z583 | |
| RDH11-004 | OTTHUMT00000412260.1 | 1064 | 248aa | OTTHUMP00000245405 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58326 | - | |
| RDH11-003 | OTTHUMT00000412259.1 | 1926 | 305aa | OTTHUMP00000245404 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| RDH11-013 | OTTHUMT00000412493.1 | 849 | 204aa | OTTHUMP00000245536 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RDH11-010 | OTTHUMT00000412496.2 | 621 | 186aa | OTTHUMP00000245538 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RDH11-011 | OTTHUMT00000412495.2 | 562 | 178aa | OTTHUMP00000245537 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RDH11-005 | OTTHUMT00000412306.1 | 1811 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RDH11-002 | OTTHUMT00000412258.1 | 947 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RDH11-009 | OTTHUMT00000412492.1 | 888 | 61aa | OTTHUMP00000245535 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| RDH11-008 | OTTHUMT00000412497.1 | 553 | 62aa | OTTHUMP00000245539 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| RDH11-006 | OTTHUMT00000412305.1 | 4035 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RDH11-012 | OTTHUMT00000412494.1 | 1163 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RDH11-007 | OTTHUMT00000412477.1 | 801 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
