Description
papilin, proteoglycan-like sulfated glycoprotein
Synonyms
MGC50452
Location
Chromosome 14: 73,237,497-73,274,640 forward strand.
VEGA68:CM000676.2
About this gene
This gene has 12 transcripts (splice variants), 21 orthologues and 19 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| PAPLN-001 | OTTHUMT00000413179.1 | 5834 | 1251aa | OTTHUMP00000245920 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32114 | - | |
| PAPLN-003 | OTTHUMT00000413183.1 | 4282 | 1262aa | OTTHUMP00000245924 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| PAPLN-002 | OTTHUMT00000413182.1 | 4090 | 1278aa | OTTHUMP00000245923 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | O95428 | |
| PAPLN-014 | OTTHUMT00000415537.1 | 2994 | 311aa | OTTHUMP00000246998 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PAPLN-010 | OTTHUMT00000413379.1 | 1819 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| PAPLN-004 | OTTHUMT00000413181.1 | 4182 | 808aa | OTTHUMP00000245922 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | B5MDP7 | |
| PAPLN-007 | OTTHUMT00000413180.1 | 4108 | 929aa | OTTHUMP00000245921 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V5P6 | |
| PAPLN-009 | OTTHUMT00000413225.1 | 3709 | 214aa | OTTHUMP00000245933 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YJA1 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| PAPLN-012 | OTTHUMT00000413381.1 | 707 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| PAPLN-008 | OTTHUMT00000413186.1 | 4668 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PAPLN-013 | OTTHUMT00000413382.1 | 784 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| PAPLN-011 | OTTHUMT00000413380.1 | 451 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
