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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (2)
- Orthologues (2)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
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Gene: SMG8 OTTHUMG00000179365

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Description

smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)

Synonyms

FLJ10587, FLJ23205

Location

Chromosome 17: 59,209,400-59,215,239 forward strand.

VEGA68:CM000679.2

About this gene

This gene has 5 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMG8-001	OTTHUMT00000445960.2	3477	991aa	OTTHUMP00000261234	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11615	Q8ND04
SMG8-002	OTTHUMT00000446019.1	2178	588aa	OTTHUMP00000261255	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SMG8-003	OTTHUMT00000446021.1	1144	271aa	OTTHUMP00000261256	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3KTD7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SMG8-004	OTTHUMT00000446022.1	583	32aa	OTTHUMP00000261257	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3QKP6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SMG8-005	OTTHUMT00000446020.1	785	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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Summary

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Gene-based displays