Description
calreticulin
Synonyms
FLJ26680, SSA, cC1qR, RO, CRT
Location
Chromosome 19: 12,938,578-12,944,489 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 8 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CALR-001 | OTTHUMT00000451952.1 | 1903 | 417aa | OTTHUMP00000264641 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12288 | P27797 | |
| CALR-006 | OTTHUMT00000451955.1 | 913 | 163aa | OTTHUMP00000264643 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EL50 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CALR-008 | OTTHUMT00000451954.2 | 776 | 247aa | OTTHUMP00000264642 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EJB9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CALR-002 | OTTHUMT00000451951.1 | 1546 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CALR-007 | OTTHUMT00000451957.1 | 394 | 13aa | OTTHUMP00000264645 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CALR-003 | OTTHUMT00000451950.1 | 957 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALR-004 | OTTHUMT00000451953.1 | 781 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CALR-005 | OTTHUMT00000451956.1 | 667 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
