Description
nuclear factor I/X (CCAAT-binding transcription factor)
Synonyms
NF1A
Location
Chromosome 19: 12,995,608-13,098,796 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 13 transcripts (splice variants), 4 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| NFIX-001 | OTTHUMT00000452762.1 | 3143 | 441aa | OTTHUMP00000265102 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45996 | - | |
| NFIX-002 | OTTHUMT00000452766.1 | 1487 | 433aa | OTTHUMP00000265106 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS59359 | - | |
| NFIX-003 | OTTHUMT00000452768.2 | 5459 | 403aa | OTTHUMP00000265108 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JWJ8 | |
| NFIX-004 | OTTHUMT00000452769.1 | 1692 | 455aa | OTTHUMP00000265109 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EN08 | |
| NFIX-007 | OTTHUMT00000452773.1 | 1537 | 440aa | OTTHUMP00000265113 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| NFIX-013 | OTTHUMT00000452763.2 | 1509 | 502aa | OTTHUMP00000265103 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q14938 | |
| NFIX-006 | OTTHUMT00000452767.1 | 1485 | 494aa | OTTHUMP00000265107 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D2DXM9 | |
| NFIX-011 | OTTHUMT00000452772.3 | 587 | 125aa | OTTHUMP00000265112 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ESG9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NFIX-010 | OTTHUMT00000452771.2 | 582 | 183aa | OTTHUMP00000265111 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EJB0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NFIX-008 | OTTHUMT00000452764.3 | 579 | 128aa | OTTHUMP00000265104 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EKH0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| NFIX-005 | OTTHUMT00000452770.1 | 1615 | 59aa | OTTHUMP00000265110 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| NFIX-009 | OTTHUMT00000452765.1 | 1083 | 101aa | OTTHUMP00000265105 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7EMQ5 | |
| NFIX-012 | OTTHUMT00000452774.1 | 319 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - |
