Description
cleft lip and palate associated transmembrane protein 1
Location
Chromosome 19: 44,954,585-44,993,341 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 13 transcripts (splice variants), 3 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CLPTM1-004 | OTTHUMT00000453266.1 | 2732 | 655aa | OTTHUMP00000265467 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS74394 | - | |
| CLPTM1-001 | OTTHUMT00000453267.1 | 2604 | 669aa | OTTHUMP00000265468 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12651 | A0A0S2Z3H2 | |
| CLPTM1-002 | OTTHUMT00000453265.1 | 2342 | 567aa | OTTHUMP00000265466 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS74395 | - | |
| CLPTM1-010 | OTTHUMT00000453276.1 | 775 | 209aa | OTTHUMP00000265472 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ERL5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CLPTM1-005 | OTTHUMT00000453270.2 | 572 | 18aa | OTTHUMP00000265470 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CLPTM1-006 | OTTHUMT00000453268.1 | 528 | 171aa | OTTHUMP00000265469 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EQQ1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CLPTM1-013 | OTTHUMT00000453269.1 | 2059 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CLPTM1-011 | OTTHUMT00000453274.1 | 638 | 152aa | OTTHUMP00000265471 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7EJ16 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CLPTM1-007 | OTTHUMT00000453272.1 | 749 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CLPTM1-003 | OTTHUMT00000453264.1 | 1522 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CLPTM1-008 | OTTHUMT00000453273.1 | 805 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CLPTM1-012 | OTTHUMT00000453271.1 | 737 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CLPTM1-009 | OTTHUMT00000453275.1 | 720 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
