Description
spectrin, beta, non-erythrocytic 4
Synonyms
KIAA1642, SPTBN3
Location
Chromosome 19: 40,466,241-40,576,464 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 14 transcripts (splice variants), 16 orthologues and 14 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SPTBN4-001 | OTTHUMT00000462559.2 | 8676 | 2564aa | OTTHUMP00000269607 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12559 | Q9H254 | |
| SPTBN4-011 | OTTHUMT00000463877.1 | 8070 | 2564aa | OTTHUMP00000270289 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12559 | Q9H254 | |
| SPTBN4-004 | OTTHUMT00000462566.1 | 2419 | 678aa | OTTHUMP00000269612 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42569 | - | |
| SPTBN4-003 | OTTHUMT00000462565.1 | 6105 | 2002aa | OTTHUMP00000269611 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | M0QZQ3 | |
| SPTBN4-002 | OTTHUMT00000462560.1 | 8748 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SPTBN4-010 | OTTHUMT00000463878.1 | 7766 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SPTBN4-012 | OTTHUMT00000463879.1 | 5957 | 701aa | OTTHUMP00000270290 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SPTBN4-009 | OTTHUMT00000462610.2 | 712 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPTBN4-013 | OTTHUMT00000463880.1 | 525 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SPTBN4-007 | OTTHUMT00000462569.1 | 1885 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPTBN4-005 | OTTHUMT00000462567.1 | 1857 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPTBN4-006 | OTTHUMT00000462568.1 | 1015 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPTBN4-008 | OTTHUMT00000462611.1 | 763 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPTBN4-014 | OTTHUMT00000463894.1 | 580 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
