Description
UPF1 regulator of nonsense transcripts homolog (yeast)
Synonyms
KIAA0221, smg-2, NORF1, pNORF1, HUPF1
Location
Chromosome 19: 18,831,938-18,868,236 forward strand.
VEGA68:CM000681.2
About this gene
This gene has 13 transcripts (splice variants), 6 orthologues and 4 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| UPF1-001 | OTTHUMT00000464683.1 | 5348 | 1118aa | OTTHUMP00000270661 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12386 | A0A024R7L5 | |
| UPF1-002 | OTTHUMT00000464684.1 | 5311 | 1129aa | OTTHUMP00000270662 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS74315 | A0A024R7L8 | |
| UPF1-007 | OTTHUMT00000464690.1 | 750 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| UPF1-008 | OTTHUMT00000464691.1 | 582 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| UPF1-004 | OTTHUMT00000464688.1 | 580 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| UPF1-003 | OTTHUMT00000464686.1 | 559 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| UPF1-011 | OTTHUMT00000464685.1 | 556 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| UPF1-006 | OTTHUMT00000464689.1 | 551 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| UPF1-005 | OTTHUMT00000464687.1 | 501 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| UPF1-012 | OTTHUMT00000464792.1 | 3825 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| UPF1-013 | OTTHUMT00000464793.1 | 3084 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| UPF1-009 | OTTHUMT00000464693.1 | 683 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| UPF1-010 | OTTHUMT00000464692.1 | 561 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
