Transcript: SVOP-001 OTTHUMT00000403982.3

Description

SV2 related protein homolog (rat)

Location

About this transcript

This transcript has 16 exons and is annotated with 24 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SVOP-001	OTTHUMT00000403982.3	6813	548aa	OTTHUMP00000241061	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS73520	Q8N4V2
SVOP-003	OTTHUMT00000403985.3	639	155aa	OTTHUMP00000241063	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YHK4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SVOP-004	OTTHUMT00000403984.2	695	104aa	OTTHUMP00000241062	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SVOP-002	OTTHUMT00000403986.2	597	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SVOP-005	OTTHUMT00000403983.1	439	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 6,813 bps Translation length: 548 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS73520

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/06/2014 (Created on 06/01/2011)

Alternative symbols

RP11-423G4.3-001

Other assemblies

This transcript maps to 108,907,741-109,021,240 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000610966

Curation Method

Manual annotation from Havana