Transcript: SVOP-005 OTTHUMT00000403983.1

Description

SV2 related protein homolog (rat)

Location

About this transcript

This transcript has 2 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SVOP-001	OTTHUMT00000403982.3	6813	548aa	OTTHUMP00000241061	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS73520	Q8N4V2
SVOP-003	OTTHUMT00000403985.3	639	155aa	OTTHUMP00000241063	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YHK4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SVOP-004	OTTHUMT00000403984.2	695	104aa	OTTHUMP00000241062	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SVOP-002	OTTHUMT00000403986.2	597	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SVOP-005	OTTHUMT00000403983.1	439	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 2 Transcript length: 439 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 06/01/2011)

Alternative symbols

RP11-423G4.3-005

Other assemblies

This transcript maps to 108,936,961-108,938,888 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000551211

Curation Method

Manual annotation from Havana