Transcript: VWA5B1-006 OTTHUMT00000389807.2

Description

von Willebrand factor A domain containing 5B1

Location

Chromosome 1: 20,303,081-20,312,942 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000002835 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
VWA5B1-001	OTTHUMT00000007945.5	3859	1220aa	OTTHUMP00000002878	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5TIE3
VWA5B1-006	OTTHUMT00000389807.2	541	82aa	OTTHUMP00000232911	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
VWA5B1-007	OTTHUMT00000389808.2	541	127aa	OTTHUMP00000232912	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
VWA5B1-004	OTTHUMT00000242830.3	3776	184aa	OTTHUMP00000232909	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
VWA5B1-002	OTTHUMT00000007946.2	3725	298aa	OTTHUMP00000232910	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
VWA5B1-003	OTTHUMT00000007947.2	2116	444aa	OTTHUMP00000232913	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
VWA5B1-005	OTTHUMT00000389809.1	1808	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 3 Transcript length: 541 bps Translation length: 82 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 08/07/2010)

Alternative symbols

RP4-745E8.1-006

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 20,303,081-20,312,942 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000530722

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: VWA5B1-006 OTTHUMT00000389807.2

Summary

Transcript-based displays