Transcript: LRRIQ3-008 OTTHUMT00000316539.1

Description

leucine-rich repeats and IQ motif containing 3

Location

Chromosome 1: 74,026,015-74,183,684 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000009508 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LRRIQ3-008	OTTHUMT00000316539.1	2673	624aa	OTTHUMP00000196434	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41350	A6PVS8
LRRIQ3-001	OTTHUMT00000026275.1	1591	199aa	OTTHUMP00000011092	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
LRRIQ3-009	OTTHUMT00000316540.1	1085	60aa	OTTHUMP00000196435	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRRIQ3-004	OTTHUMT00000026520.2	793	191aa	OTTHUMP00000196437	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
LRRIQ3-005	OTTHUMT00000026521.2	372	105aa	OTTHUMP00000196438	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRRIQ3-003	OTTHUMT00000026519.2	4524	299aa	OTTHUMP00000196436	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LRRIQ3-007	OTTHUMT00000026523.2	795	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LRRIQ3-006	OTTHUMT00000026522.1	289	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LRRIQ3-002	OTTHUMT00000026276.1	3614	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 2,673 bps Translation length: 624 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS41350

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 12/03/2007)

Alternative symbols

RP11-60K15.1-008

Annotation Attributes

not organism-supported [Definitions]

RNA-Seq supported only

Other assemblies

This transcript maps to 74,026,015-74,183,684 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000395089

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: LRRIQ3-008 OTTHUMT00000316539.1

Summary

Transcript-based displays