Transcript: KCNC4-008 OTTHUMT00000489419.1

Description

potassium voltage-gated channel, Shaw-related subfamily, member 4

Location

Chromosome 1: 110,223,830-110,229,151 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000011037 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
KCNC4-004	OTTHUMT00000052146.3	18750	635aa	OTTHUMP00000195596	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS821	Q03721
KCNC4-003	OTTHUMT00000035923.4	2953	626aa	OTTHUMP00000229419	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44193	-
KCNC4-006	OTTHUMT00000390341.1	3018	624aa	OTTHUMP00000233377	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BZ66
KCNC4-008	OTTHUMT00000489419.1	894	147aa	OTTHUMP00000282056	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GVB7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
KCNC4-001	OTTHUMT00000030364.5	3487	635aa	OTTHUMP00000012717	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS821	Q03721
KCNC4-007	OTTHUMT00000390342.1	251	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
KCNC4-002	OTTHUMT00000030388.1	7597	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
KCNC4-005	OTTHUMT00000314641.2	1955	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 894 bps Translation length: 147 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 20/11/2015 (Created on 20/11/2015)

Alternative symbols

RP5-1003J2.1-008

Annotation Attributes

non-submitted evidence [Definitions]

not organism-supported

Remarks

cow EST CK846082 supports this model

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 110,223,830-110,229,151 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000636402

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: KCNC4-008 OTTHUMT00000489419.1

Summary

Transcript-based displays