Transcript: PPM1J-005 OTTHUMT00000100387.2

Description

protein phosphatase 1J (PP2C domain containing)

Location

About this transcript

This transcript has 10 exons and is annotated with 13 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PPM1J-001	OTTHUMT00000033251.1	1863	505aa	OTTHUMP00000013810	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS855	Q5JR12
PPM1J-002	OTTHUMT00000033252.3	2474	299aa	OTTHUMP00000273403	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
PPM1J-005	OTTHUMT00000100387.2	1496	298aa	OTTHUMP00000272888	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	S4R3I3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PPM1J-004	OTTHUMT00000033254.2	1001	150aa	OTTHUMP00000272889	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	S4R3C3
PPM1J-003	OTTHUMT00000033253.1	847	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,496 bps Translation length: 298 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 27/02/2014 (Created on 30/06/2004)

Alternative symbols

RP11-426L16.5-005

Remarks

non canonical TEC

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 112,709,994-112,715,255 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000471106

Curation Method

Manual annotation from Havana