Transcript: SYCP2L-002 OTTHUMT00000039846.3

Description

synaptonemal complex protein 2-like

Location

About this transcript

This transcript has 30 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SYCP2L-001	OTTHUMT00000039845.3	3130	812aa	OTTHUMP00000016027	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43423	Q5T4T6
SYCP2L-002	OTTHUMT00000039846.3	3069	291aa	OTTHUMP00000214302	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SYCP2L-003	OTTHUMT00000353739.1	644	109aa	OTTHUMP00000214301	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SYCP2L-005	OTTHUMT00000353741.1	324	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYCP2L-006	OTTHUMT00000353742.1	293	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYCP2L-004	OTTHUMT00000353740.1	728	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 30 Transcript length: 3,069 bps Translation length: 291 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 02/04/2002)

Alternative symbols

RP1-62D2.1-002

Other assemblies

This transcript maps to 10,886,831-10,974,194 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000341041

Curation Method

Manual annotation from Havana