Transcript: EPSTI1-003 OTTHUMT00000276154.2

Description

epithelial stromal interaction 1 (breast)

Location

Chromosome 13: 42,886,388-42,992,230 reverse strand.

About this transcript

This transcript has 13 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000016814 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
EPSTI1-003	OTTHUMT00000276154.2	3160	410aa	OTTHUMP00000178586	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31964
EPSTI1-001	OTTHUMT00000044711.3	3114	307aa	OTTHUMP00000018331	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9387
EPSTI1-010	OTTHUMT00000400321.2	957	318aa	OTTHUMP00000239084	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81765
EPSTI1-008	OTTHUMT00000400323.2	561	78aa	OTTHUMP00000239085	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
EPSTI1-006	OTTHUMT00000400324.1	574	80aa	OTTHUMP00000239086	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
EPSTI1-002	OTTHUMT00000044712.1	785	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
EPSTI1-005	OTTHUMT00000400326.1	598	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
EPSTI1-009	OTTHUMT00000400322.1	585	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
EPSTI1-007	OTTHUMT00000400325.1	537	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
EPSTI1-004	OTTHUMT00000400320.1	4603	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 13 Transcript length: 3,160 bps Translation length: 410 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS31964

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 10/08/2006)

Alternative symbols

RP11-145J3.1-003

Other assemblies

This transcript maps to 42,886,388-42,992,230 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000313640

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: EPSTI1-003 OTTHUMT00000276154.2

Summary

Transcript-based displays