Transcript: HIF1AN-004 OTTHUMT00000390732.3

Description

hypoxia inducible factor 1, alpha subunit inhibitor

Location

About this transcript

This transcript has 6 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HIF1AN-002	OTTHUMT00000049865.5	13011	349aa	OTTHUMP00000020284	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS7498	Q9NWT6
HIF1AN-004	OTTHUMT00000390732.3	1042	191aa	OTTHUMP00000233708	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HIF1AN-005	OTTHUMT00000390733.1	708	35aa	OTTHUMP00000233709	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
HIF1AN-006	OTTHUMT00000390734.1	559	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HIF1AN-003	OTTHUMT00000049866.1	888	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,042 bps Translation length: 191 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/07/2015 (Created on 19/07/2010)

Alternative symbols

RP11-411B6.1-004

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 100,529,072-100,546,581 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000533589

Curation Method

Manual annotation from Havana