Transcript: SPTA1-001 OTTHUMT00000051851.3

Description

spectrin, alpha, erythrocytic 1 (elliptocytosis 2)

Location

Chromosome 1: 158,610,706-158,686,698 reverse strand.

About this transcript

This transcript has 52 exons and is annotated with 123 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000019636 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SPTA1-001	OTTHUMT00000051851.3	7999	2419aa	OTTHUMP00000021115	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41423	P02549
SPTA1-003	OTTHUMT00000089863.3	465	124aa	OTTHUMP00000273956	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SPTA1-010	OTTHUMT00000090093.1	422	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SPTA1-005	OTTHUMT00000089865.1	930	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SPTA1-007	OTTHUMT00000089867.1	771	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SPTA1-006	OTTHUMT00000089866.1	769	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SPTA1-004	OTTHUMT00000089864.1	718	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SPTA1-009	OTTHUMT00000090092.1	643	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SPTA1-008	OTTHUMT00000090091.1	600	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 52 Transcript length: 7,999 bps Translation length: 2,419 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS41423

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 27/02/2014 (Created on 04/03/2004)

Alternative symbols

RP11-452O22.2-001

Other assemblies

This transcript maps to 158,610,706-158,686,698 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000368147

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SPTA1-001 OTTHUMT00000051851.3

Summary

Transcript-based displays