Transcript: DNAI1-007 OTTHUMT00000052198.3

Description

dynein, axonemal, intermediate chain 1

Location

Chromosome 9: 34,506,627-34,517,467 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000019825 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
DNAI1-001	OTTHUMT00000052192.2	2504	699aa	OTTHUMP00000021280	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6557	Q9UI46
DNAI1-002	OTTHUMT00000052193.6	1039	289aa	OTTHUMP00000021281	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
DNAI1-006	OTTHUMT00000052197.2	656	142aa	OTTHUMP00000021282	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
DNAI1-007	OTTHUMT00000052198.3	789	175aa	OTTHUMP00000021283	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
DNAI1-004	OTTHUMT00000052195.1	932	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
DNAI1-003	OTTHUMT00000052194.1	856	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
DNAI1-005	OTTHUMT00000052196.1	577	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
DNAI1-008	OTTHUMT00000052199.1	240	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 6 Transcript length: 789 bps Translation length: 175 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 11/12/2003)

Alternative symbols

RP11-296L22.2-007

Remarks

dynein, axonemal, intermediate polypeptide 1 (ICS, PCD, CILD1, dynein, axonemal, intermediate chain 1)

this variant fragment and one or more of variant fragments bA296L22.2.8 or bA296L22.2.2 to bA296L22.2.4 could be part of a single variant

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 34,506,627-34,517,467 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000470169

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: DNAI1-007 OTTHUMT00000052198.3

Summary

Transcript-based displays