Transcript: C9orf135-002 OTTHUMT00000052592.2

Description

chromosome 9 open reading frame 135

Location

Chromosome 9: 69,820,960-69,858,158 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000019985 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
C9orf135-001	OTTHUMT00000052591.1	873	229aa	OTTHUMP00000021439	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35041	Q5VTT2
C9orf135-006	OTTHUMT00000388712.1	748	159aa	OTTHUMP00000232342	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS78403	-
C9orf135-002	OTTHUMT00000052592.2	550	149aa	OTTHUMP00000232346	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
C9orf135-007	OTTHUMT00000388714.1	825	50aa	OTTHUMP00000232344	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
C9orf135-005	OTTHUMT00000388713.1	697	50aa	OTTHUMP00000232343	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
C9orf135-003	OTTHUMT00000052593.2	502	37aa	OTTHUMP00000232345	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
C9orf135-004	OTTHUMT00000052594.2	794	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 4 Transcript length: 550 bps Translation length: 149 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 16/04/2003)

Alternative symbols

RP11-20D12.1-002

Remarks

novel protein, possible ortholog of mouse RIKEN cDNA 1700028P14 gene

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 69,820,960-69,858,158 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000480564

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: C9orf135-002 OTTHUMT00000052592.2

Summary

Transcript-based displays