Transcript: PCDH19-007 OTTHUMT00000490977.1

Description

protocadherin 19

Location

About this transcript

This transcript has 3 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PCDH19-002	OTTHUMT00000057479.2	9756	1148aa	OTTHUMP00000023650	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55462	Q8TAB3
PCDH19-001	OTTHUMT00000057478.2	7937	1101aa	OTTHUMP00000023649	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43976	B3KU71
PCDH19-004	OTTHUMT00000378687.1	7936	1100aa	OTTHUMP00000226658	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48141	-
PCDH19-007	OTTHUMT00000490977.1	160	53aa	OTTHUMP00000282895	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GVC8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PCDH19-003	OTTHUMT00000057480.2	329	7aa	OTTHUMP00000275581	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 3 Transcript length: 160 bps Translation length: 53 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2016 (Created on 10/03/2016)

Alternative symbols

RP11-99E24.1-007

Annotation Attributes

RNA-Seq supported only [Definitions]

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 100,350,662-100,406,515 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000636150

Curation Method

Manual annotation from Havana