Transcript: PLS3-009 OTTHUMT00000487774.1

Description

plastin 3

Location

Chromosome X: 115,593,608-115,650,672 forward strand.

About this transcript

This transcript has 16 exons and is annotated with 33 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000022237 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PLS3-001	OTTHUMT00000057976.4	3280	630aa	OTTHUMP00000023876	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14568	P13797
PLS3-009	OTTHUMT00000487774.1	3037	630aa	OTTHUMP00000280987	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14568	P13797
PLS3-005	OTTHUMT00000356068.4	2277	617aa	OTTHUMP00000215746	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS78499	-
PLS3-007	OTTHUMT00000356233.2	568	190aa	OTTHUMP00000215829	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PLS3-006	OTTHUMT00000356232.2	500	164aa	OTTHUMP00000273281	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	U3KQI3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PLS3-004	OTTHUMT00000356067.1	2858	42aa	OTTHUMP00000215745	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PLS3-002	OTTHUMT00000057977.3	926	42aa	OTTHUMP00000215747	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PLS3-008	OTTHUMT00000356234.1	561	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 3,037 bps Translation length: 630 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS14568

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 08/01/2015 (Created on 08/01/2015)

Alternative symbols

RP1-241P17.6-009

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 115,593,608-115,650,672 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000539310

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PLS3-009 OTTHUMT00000487774.1

Summary

Transcript-based displays