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Description

alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)

Location
About this transcript

This transcript has 14 exons and is annotated with 23 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
ATRX-001OTTHUMT00000058860.4112202492aaOTTHUMP00000024265
 
Protein coding
CCDS14434P46100
ATRX-002OTTHUMT00000058861.4102182454aaOTTHUMP00000024266
 
Protein coding
CCDS14435-
ATRX-010OTTHUMT00000479530.342721351aaOTTHUMP00000278093
 
Protein coding
--CDS 3' incomplete
ATRX-004OTTHUMT00000479516.23071954aaOTTHUMP00000278090
 
Protein coding
--CDS 3' incomplete
ATRX-005OTTHUMT00000058864.22967293aaOTTHUMP00000278089
 
Protein coding
--CDS 5' incomplete
ATRX-009OTTHUMT00000479531.21860528aaOTTHUMP00000278094
 
Protein coding
--CDS 3' incomplete
ATRX-007OTTHUMT00000058866.3814198aaOTTHUMP00000024268
 
Protein coding
-H0Y3T0 CDS 5' incomplete
ATRX-012OTTHUMT00000479533.262847aaOTTHUMP00000278096
 
Protein coding
--CDS 3' incomplete
ATRX-015OTTHUMT00000479577.2593198aaOTTHUMP00000278111
 
Protein coding
--CDS 5' and 3' incomplete
ATRX-013OTTHUMT00000479532.2583108aaOTTHUMP00000278095
 
Protein coding
--CDS 3' incomplete
ATRX-003OTTHUMT00000058862.410455164aaOTTHUMP00000276710
 
Nonsense mediated decay
--
ATRX-018OTTHUMT00000479574.1803175aaOTTHUMP00000278109
 
Nonsense mediated decay
--CDS 5' incomplete
ATRX-016OTTHUMT00000479576.172566aaOTTHUMP00000278110
 
Nonsense mediated decay
--CDS 5' incomplete
ATRX-020OTTHUMT00000490549.11006aaOTTHUMP00000282748
 
Nonsense mediated decay
--CDS 5' incomplete
ATRX-014OTTHUMT00000479534.1463No protein-
 
Processed transcript
--
ATRX-021OTTHUMT00000490553.1100No protein-
 
Processed transcript
--
ATRX-022OTTHUMT00000490552.1100No protein-
 
Processed transcript
--
ATRX-023OTTHUMT00000490551.1100No protein-
 
Processed transcript
--
ATRX-024OTTHUMT00000490550.186No protein-
 
Processed transcript
--
ATRX-011OTTHUMT00000479529.17245No protein-
 
Retained intron
--
ATRX-017OTTHUMT00000479575.1583No protein-
 
Retained intron
--
ATRX-019OTTHUMT00000479573.1580No protein-
 
Retained intron
--
ATRX-006OTTHUMT00000058865.2461No protein-
 
Retained intron
--
ATRX-008OTTHUMT00000058867.1408No protein-
 
Retained intron
--
Statistics

Exons: 14 Transcript length: 4,272 bps Translation length: 1,351 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/07/2015 (Created on 17/06/2014)

Alternative symbols

RP5-875J14.1-010

Remarks

NAGNAG splice site

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 77,654,158-77,786,220 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays