Transcript: TTC5-002 OTTHUMT00000410353.1

Description

tetratricopeptide repeat domain 5

Location

Chromosome 14: 20,289,131-20,305,941 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000029506 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TTC5-001	OTTHUMT00000073529.4	4779	440aa	OTTHUMP00000163990	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9546	Q8N0Z6
TTC5-005	OTTHUMT00000410356.2	748	15aa	OTTHUMP00000244396	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TTC5-003	OTTHUMT00000073530.4	1254	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TTC5-002	OTTHUMT00000410353.1	1755	128aa	OTTHUMP00000244395	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TTC5-007	OTTHUMT00000443561.1	875	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TTC5-008	OTTHUMT00000443562.1	621	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TTC5-004	OTTHUMT00000410354.1	5014	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TTC5-006	OTTHUMT00000410355.1	682	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,755 bps Translation length: 128 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 10/03/2011)

Alternative symbols

AL356019.1-002

Other assemblies

This transcript maps to 20,289,131-20,305,941 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000383029

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TTC5-002 OTTHUMT00000410353.1

Summary

Transcript-based displays