Transcript: HLA-DPA1-003 OTTHUMT00000276582.2

Description

major histocompatibility complex, class II, DP alpha 1

Location

Chromosome 6: 33,065,007-33,073,615 reverse strand.

About this transcript

This transcript has 2 exons.

Gene

This transcript is a product of gene OTTHUMG00000031058 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HLA-DPA1-001	OTTHUMT00000076071.3	1704	260aa	OTTHUMP00000029066	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4764	X5CKE2
HLA-DPA1-008	OTTHUMT00000276607.1	1375	128aa	OTTHUMP00000178781	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y6F8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
HLA-DPA1-002	OTTHUMT00000076072.5	918	209aa	OTTHUMP00000029067	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140T9F8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HLA-DPA1-004	OTTHUMT00000276583.3	305	23aa	OTTHUMP00000178769	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HLA-DPA1-007	OTTHUMT00000276586.1	580	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HLA-DPA1-005	OTTHUMT00000276584.1	519	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
HLA-DPA1-003	OTTHUMT00000276582.2	5025	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 2 Transcript length: 5,025 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 25/08/2006)

Alternative symbols

XXbac-BPG138A21.5-003

Other assemblies

This transcript maps to 33,065,007-33,073,615 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000479107

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HLA-DPA1-003 OTTHUMT00000276582.2

Summary

Transcript-based displays