Transcript: MSH5-SAPCD1-002 OTTHUMT00000076232.3

Description

MSH5-SAPCD1 readthrough (non-protein coding)

Location

About this transcript

This transcript has 4 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
MSH5-SAPCD1-001	OTTHUMT00000395551.2	3991	851aa	OTTHUMP00000236429	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A024RCV8
MSH5-SAPCD1-003	OTTHUMT00000076247.3	2216	264aa	OTTHUMP00000215269	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YF11	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
MSH5-SAPCD1-002	OTTHUMT00000076232.3	950	29aa	OTTHUMP00000236152	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
MSH5-SAPCD1-004	OTTHUMT00000268168.4	706	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 4 Transcript length: 950 bps Translation length: 29 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 18/07/2003)

Alternative symbols

XXbac-BPG32J3.21-002

Annotation Attributes

readthrough [Definitions]

Remarks

alternative 3' UTR

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 31,762,444-31,764,851 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000476085

Curation Method

Manual annotation from Havana