Transcript: CRNKL1-001 OTTHUMT00000078219.2

Description

crooked neck pre-mRNA splicing factor-like 1 (Drosophila)

Location

About this transcript

This transcript has 15 exons and is annotated with 32 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
CRNKL1-002	OTTHUMT00000127787.1	4406	848aa	OTTHUMP00000063214	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33446	Q9BZJ0
CRNKL1-001	OTTHUMT00000078219.2	4370	836aa	OTTHUMP00000030376	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS63239	Q5JY65
CRNKL1-007	OTTHUMT00000378075.1	4009	687aa	OTTHUMP00000226341	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS63238	-
CRNKL1-003	OTTHUMT00000127788.3	4183	104aa	OTTHUMP00000226339	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CRNKL1-004	OTTHUMT00000127789.2	4093	74aa	OTTHUMP00000226340	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
CRNKL1-006	OTTHUMT00000378076.1	673	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CRNKL1-005	OTTHUMT00000127790.1	733	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 4,370 bps Translation length: 836 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS63239

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 11/11/2003)

Alternative symbols

RP5-1002M8.1-001

Remarks

AT-AC splicing between exons 6 and 7

DKFZp762M013, FLJ12846, FLJ13184, FLJ13666, FLJ22689

Other assemblies

This transcript maps to 20,034,368-20,056,046 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000377327

Curation Method

Manual annotation from Havana