Transcript: ITCH-007 OTTHUMT00000078788.2

Description

itchy E3 ubiquitin protein ligase homolog (mouse)

Location

About this transcript

This transcript has 5 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ITCH-001	OTTHUMT00000078782.1	6401	862aa	OTTHUMP00000030688	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13234	-
ITCH-002	OTTHUMT00000078783.2	3089	903aa	OTTHUMP00000030689	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58768	Q96J02
ITCH-008	OTTHUMT00000491559.1	2940	752aa	OTTHUMP00000283298	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58769	-
ITCH-003	OTTHUMT00000078784.2	703	158aa	OTTHUMP00000283297	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ITCH-007	OTTHUMT00000078788.2	450	37aa	OTTHUMP00000283299	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ITCH-005	OTTHUMT00000078786.1	1070	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ITCH-004	OTTHUMT00000078785.1	205	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 450 bps Translation length: 37 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/10/2016 (Created on 13/03/2003)

Alternative symbols

RP3-468O1.1-007

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 34,471,501-34,481,182 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000461661

Curation Method

Manual annotation from Havana