Transcript: C20orf100-004 OTTHUMT00000079332.3

Description

chromosome 20 open reading frame 100

Location

About this transcript

This transcript has 3 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
C20orf100-001	OTTHUMT00000079329.2	2605	488aa	OTTHUMP00000031037	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS42875	Q96NM4
C20orf100-002	OTTHUMT00000079330.1	2519	464aa	OTTHUMP00000031038	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13324	-
C20orf100-003	OTTHUMT00000079331.2	1880	506aa	OTTHUMP00000031039	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46603	-
C20orf100-006	OTTHUMT00000472001.1	1709	464aa	OTTHUMP00000274117	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13324	-
C20orf100-004	OTTHUMT00000079332.3	1271	196aa	OTTHUMP00000031040	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
C20orf100-005	OTTHUMT00000472002.1	2262	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 3 Transcript length: 1,271 bps Translation length: 196 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 14/03/2003)

Alternative symbols

RP5-1108D11.1-004

Remarks

novel HMG (high mobility group) box protein similar to KIAA0737, KIAA0808 and TNRC9 (CAGF9)

this variant and variant fragment .2.3 could be part of one single variant

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 44,054,351-44,069,616 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000413823

Curation Method

Manual annotation from Havana