Transcript: BCAS4-005 OTTHUMT00000157061.3

Description

breast carcinoma amplified sequence 4

Location

About this transcript

This transcript has 6 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
BCAS4-002	OTTHUMT00000079701.4	6680	203aa	OTTHUMP00000031273	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13432	-
BCAS4-001	OTTHUMT00000079700.1	1378	211aa	OTTHUMP00000031272	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33487	Q8TDM0
BCAS4-006	OTTHUMT00000471722.1	787	181aa	OTTHUMP00000273961	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
BCAS4-003	OTTHUMT00000079702.3	365	117aa	OTTHUMP00000031274	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
BCAS4-005	OTTHUMT00000157061.3	1498	89aa	OTTHUMP00000215950	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
BCAS4-004	OTTHUMT00000157060.1	560	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,498 bps Translation length: 89 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 07/06/2005)

Alternative symbols

RP5-1071L10.2-005

Annotation Attributes

dotter confirmed [Definitions]

RP supported TIS

Remarks

CAGE supported TSS

Other assemblies

This transcript maps to 50,795,071-50,877,177 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000463943

Curation Method

Manual annotation from Havana