Transcript: SPO11-005 OTTHUMT00000079840.3

Description

SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)

Location

About this transcript

This transcript has 7 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SPO11-001	OTTHUMT00000079836.2	1834	396aa	OTTHUMP00000031360	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13456	Q9Y5K1
SPO11-002	OTTHUMT00000079837.2	1666	358aa	OTTHUMP00000031361	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13457	-
SPO11-003	OTTHUMT00000079838.2	1608	354aa	OTTHUMP00000031362	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5TCH7
SPO11-004	OTTHUMT00000079839.6	810	270aa	OTTHUMP00000031363	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5TCH6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SPO11-005	OTTHUMT00000079840.3	1133	123aa	OTTHUMP00000031364	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YCK9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 7 Transcript length: 1,133 bps Translation length: 123 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 17/03/2003)

Alternative symbols

RP3-481F12.5-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 57,334,750-57,343,994 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000494972

Curation Method

Manual annotation from Havana