Transcript: CTSS-004 OTTHUMT00000084740.2

Description

cathepsin S

Location

Chromosome 1: 150,730,882-150,750,091 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000035010 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CTSS-001	OTTHUMT00000084737.1	4107	331aa	OTTHUMP00000032942	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS968	P25774
CTSS-006	OTTHUMT00000471041.1	1421	281aa	OTTHUMP00000273607	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55634	-
CTSS-003	OTTHUMT00000084739.2	752	117aa	OTTHUMP00000273608	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	U3KQE7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CTSS-004	OTTHUMT00000084740.2	673	96aa	OTTHUMP00000273605	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	U3KPS4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CTSS-005	OTTHUMT00000471040.1	390	5aa	OTTHUMP00000273606	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CTSS-002	OTTHUMT00000084738.1	650	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 4 Transcript length: 673 bps Translation length: 96 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 27/02/2014 (Created on 24/03/2004)

Alternative symbols

RP11-363I22.2-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 150,730,882-150,750,091 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000472977

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CTSS-004 OTTHUMT00000084740.2

Summary

Transcript-based displays