Transcript: EPRS-007 OTTHUMT00000472508.2

Description

glutamyl-prolyl-tRNA synthetase

Location

Chromosome 1: 219,987,296-220,046,451 reverse strand.

About this transcript

This transcript has 21 exons and is annotated with 45 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000037433 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
EPRS-001	OTTHUMT00000091133.2	5014	1512aa	OTTHUMP00000035562	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31027	P07814
EPRS-007	OTTHUMT00000472508.2	2968	968aa	OTTHUMP00000274318	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	V9GYZ6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
EPRS-002	OTTHUMT00000091134.3	500	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
EPRS-006	OTTHUMT00000472438.1	1526	194aa	OTTHUMP00000274281	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
EPRS-005	OTTHUMT00000098799.1	458	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
EPRS-003	OTTHUMT00000091135.1	770	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
EPRS-004	OTTHUMT00000098798.1	598	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 21 Transcript length: 2,968 bps Translation length: 968 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 17/06/2013)

Alternative symbols

RP11-544K18.4-007

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 219,987,296-220,046,451 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000609181

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: EPRS-007 OTTHUMT00000472508.2

Summary

Transcript-based displays