Transcript: KLHL17-004 OTTHUMT00000097878.2

Description

kelch-like 17 (Drosophila)

Location

About this transcript

This transcript has 6 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
KLHL17-001	OTTHUMT00000097875.3	2560	642aa	OTTHUMP00000038433	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS30550	Q6TDP4
KLHL17-002	OTTHUMT00000097876.3	2207	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
KLHL17-004	OTTHUMT00000097878.2	913	154aa	OTTHUMP00000262416	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3QLT4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
KLHL17-003	OTTHUMT00000097877.1	955	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
KLHL17-005	OTTHUMT00000097931.2	515	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 913 bps Translation length: 154 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 27/02/2014 (Created on 28/05/2004)

Alternative symbols

RP11-54O7.6-004

Remarks

novel transcript

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 962,727-964,530 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000466300

Curation Method

Manual annotation from Havana