Transcript: GATC-005 OTTHUMT00000403670.1

Description

glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)

Location

Chromosome 12: 120,446,444-120,460,344 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000047788 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
GATC-001	OTTHUMT00000108981.4	4244	136aa	OTTHUMP00000045454	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31911	O43716
GATC-006	OTTHUMT00000403674.2	372	47aa	OTTHUMP00000240884	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3KMY1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
GATC-004	OTTHUMT00000403673.1	3709	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
GATC-003	OTTHUMT00000403672.1	1876	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
GATC-002	OTTHUMT00000403671.1	1816	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
GATC-005	OTTHUMT00000403670.1	931	121aa	OTTHUMP00000240883	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8VRU3

Summary

Statistics

Exons: 5 Transcript length: 931 bps Translation length: 121 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 23/12/2010)

Alternative symbols

AL021546.4-005

Other assemblies

This transcript maps to 120,446,444-120,460,344 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000548171

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: GATC-005 OTTHUMT00000403670.1

Summary

Transcript-based displays