Transcript: SAMD12-001 OTTHUMT00000132989.3

Description

sterile alpha motif domain containing 12

Location

Chromosome 8: 118,377,988-118,621,953 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000059817 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
SAMD12-001	OTTHUMT00000132989.3	2172	201aa	OTTHUMP00000066180	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6325
SAMD12-006	OTTHUMT00000381869.1	1982	148aa	OTTHUMP00000228445	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SAMD12-003	OTTHUMT00000381870.1	625	153aa	OTTHUMP00000228446	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SAMD12-002	OTTHUMT00000143864.4	592	154aa	OTTHUMP00000203662	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SAMD12-004	OTTHUMT00000381872.1	507	169aa	OTTHUMP00000228447	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SAMD12-005	OTTHUMT00000330658.2	520	68aa	OTTHUMP00000203660	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
SAMD12-007	OTTHUMT00000381871.1	202	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-

Summary

Statistics

Exons: 4 Transcript length: 2,172 bps Translation length: 201 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6325

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 06/01/2005)

Alternative symbols

AC023590.2-001

Remarks

5RACE341_AC023590.2-001_from_encode_region_ENr321:_exons_1-1_/_1Single_exon_gene:_only_1_exon_submitted_Spleen

Other assemblies

This transcript maps to 118,377,988-118,621,953 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000314727

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SAMD12-001 OTTHUMT00000132989.3

Summary

Transcript-based displays