Transcript: JAM2-007 OTTHUMT00000171353.3

Description

junctional adhesion molecule 2

Location

About this transcript

This transcript has 9 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
JAM2-001	OTTHUMT00000171347.1	4337	298aa	OTTHUMP00000096100	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS42911	P57087
JAM2-003	OTTHUMT00000171349.1	1757	312aa	OTTHUMP00000096102	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58787	-
JAM2-007	OTTHUMT00000171353.3	1025	261aa	OTTHUMP00000096105	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YEX9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
JAM2-008	OTTHUMT00000171354.1	311	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
JAM2-006	OTTHUMT00000171352.1	946	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
JAM2-009	OTTHUMT00000171355.1	614	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,025 bps Translation length: 261 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 13/07/2005)

Alternative symbols

AP000226.2-007

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 25,689,866-25,714,731 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000460679

Curation Method

Manual annotation from Havana