Transcript: LTN1-008 OTTHUMT00000472108.1

Description

listerin E3 ubiquitin protein ligase 1

Location

About this transcript

This transcript has 30 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LTN1-001	OTTHUMT00000171851.2	7749	1812aa	OTTHUMP00000096472	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33527	-
LTN1-008	OTTHUMT00000472108.1	7685	1766aa	OTTHUMP00000274200	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	O94822
LTN1-002	OTTHUMT00000171852.1	2714	813aa	OTTHUMP00000096473	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
LTN1-004	OTTHUMT00000171854.2	1753	366aa	OTTHUMP00000272669	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LTN1-005	OTTHUMT00000171855.1	696	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LTN1-006	OTTHUMT00000171856.1	539	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 30 Transcript length: 7,685 bps Translation length: 1,766 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 24/05/2013)

Alternative symbols

AF260011.3-008

Remarks

CAGE supported TSS

Other assemblies

This transcript maps to 28,928,144-28,992,885 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000361371

Curation Method

Manual annotation from Havana