Transcript: PSMB6-003 OTTHUMT00000439784.1

Description

proteasome (prosome, macropain) subunit, beta type, 6

Location

About this transcript

This transcript has 6 exons and is annotated with 8 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PSMB6-001	OTTHUMT00000207559.3	852	239aa	OTTHUMP00000115982	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11056	Q6IAT9
PSMB6-003	OTTHUMT00000439784.1	583	102aa	OTTHUMP00000258107	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	I3L3X7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PSMB6-004	OTTHUMT00000439785.1	666	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PSMB6-002	OTTHUMT00000439783.1	583	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 583 bps Translation length: 102 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 24/11/2011)

Alternative symbols

AC109333.3-003

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 4,796,204-4,798,329 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000571309

Curation Method

Manual annotation from Havana