Transcript: FAM179A-003 OTTHUMT00000317848.4

Description

family with sequence similarity 179, member A

Location

Chromosome 2: 28,981,298-29,061,373 forward strand.

About this transcript

This transcript has 20 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000128432 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
FAM179A-003	OTTHUMT00000317848.4	12691	1019aa	OTTHUMP00000197215	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1769
FAM179A-007	OTTHUMT00000324897.2	720	162aa	OTTHUMP00000200999	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
FAM179A-005	OTTHUMT00000324877.1	658	112aa	OTTHUMP00000200990	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
FAM179A-004	OTTHUMT00000324876.2	493	69aa	OTTHUMP00000200989	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
FAM179A-001	OTTHUMT00000250222.2	1932	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
FAM179A-002	OTTHUMT00000250223.2	7450	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
FAM179A-006	OTTHUMT00000324878.1	616	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 20 Transcript length: 12,691 bps Translation length: 1,019 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS1769

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 27/02/2014 (Created on 17/07/2007)

Alternative symbols

AC105398.1-003

Annotation Attributes

not organism-supported [Definitions]

Remarks

LOC165186 similar to RIKEN cDNA 4632412N22 gene

Other assemblies

This transcript maps to 28,981,298-29,061,373 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000379558

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: FAM179A-003 OTTHUMT00000317848.4

Summary

Transcript-based displays