Transcript: LOX-001 OTTHUMT00000250887.2

Description

lysyl oxidase

Location

About this transcript

This transcript has 7 exons and is annotated with 23 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LOX-001	OTTHUMT00000250887.2	5102	417aa	OTTHUMP00000159161	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4129	D0PNI2
LOX-004	OTTHUMT00000371234.1	1573	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
LOX-006	OTTHUMT00000371236.1	561	61aa	OTTHUMP00000222999	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LOX-002	OTTHUMT00000371232.1	1543	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LOX-005	OTTHUMT00000371235.1	1379	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LOX-003	OTTHUMT00000371233.1	1643	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 5,102 bps Translation length: 417 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4129

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 26/10/2005)

Alternative symbols

AC117523.2-001

Other assemblies

This transcript maps to 122,063,195-122,078,285 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000231004

Curation Method

Manual annotation from Havana