Transcript: PRR27-001 OTTHUMT00000251558.1

Description

proline rich 27

Location

Chromosome 4: 70,154,187-70,164,939 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000129402 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PRR27-001	OTTHUMT00000251558.1	3127	219aa	OTTHUMP00000159768	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3535	Q6MZM9
PRR27-002	OTTHUMT00000362212.1	3007	219aa	OTTHUMP00000218951	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3535	Q6MZM9
PRR27-003	OTTHUMT00000362213.1	4739	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PRR27-005	OTTHUMT00000362215.1	4637	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PRR27-004	OTTHUMT00000362214.1	4784	26aa	OTTHUMP00000218952	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PRR27-007	OTTHUMT00000362604.1	641	61aa	OTTHUMP00000219132	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PRR27-006	OTTHUMT00000362603.3	667	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 3,127 bps Translation length: 219 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3535

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 02/03/2016 (Created on 10/11/2005)

Alternative symbols

AC104811.1-001

Other assemblies

This transcript maps to 70,154,187-70,164,939 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000634325 ENST00000344526

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PRR27-001 OTTHUMT00000251558.1

Summary

Transcript-based displays