Transcript: RABGEF1-007 OTTHUMT00000472515.1

Description

RAB guanine nucleotide exchange factor (GEF) 1

Location

About this transcript

This transcript has 10 exons and is annotated with 8 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RABGEF1-001	OTTHUMT00000251737.3	3733	491aa	OTTHUMP00000159944	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5535	A0A024RDL6
RABGEF1-002	OTTHUMT00000345648.2	2281	491aa	OTTHUMP00000210543	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5535	A0A024RDL6
RABGEF1-003	OTTHUMT00000345649.2	3065	504aa	OTTHUMP00000210544	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PFK9
RABGEF1-005	OTTHUMT00000345651.3	553	45aa	OTTHUMP00000210545	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JDA2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RABGEF1-007	OTTHUMT00000472515.1	2654	119aa	OTTHUMP00000274320	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	V9GYI8
RABGEF1-004	OTTHUMT00000345650.3	1596	94aa	OTTHUMP00000283943	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
RABGEF1-006	OTTHUMT00000345652.1	711	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 10 Transcript length: 2,654 bps Translation length: 119 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 17/06/2013)

Alternative symbols

AC027644.5-007

Other assemblies

This transcript maps to 66,682,164-66,809,662 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000607882

Curation Method

Manual annotation from Havana