Transcript: GALNT10-001 OTTHUMT00000252453.1

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)

Location

Chromosome 5: 154,190,730-154,420,984 forward strand.

About this transcript

This transcript has 12 exons and is annotated with 14 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000130145 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
GALNT10-001	OTTHUMT00000252453.1	5961	603aa	OTTHUMP00000160640	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4325	Q86SR1
GALNT10-005	OTTHUMT00000374272.2	4344	366aa	OTTHUMP00000224329	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
GALNT10-003	OTTHUMT00000374249.2	3778	541aa	OTTHUMP00000224314	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
GALNT10-004	OTTHUMT00000374250.1	4359	202aa	OTTHUMP00000224315	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
GALNT10-009	OTTHUMT00000374276.1	744	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
GALNT10-007	OTTHUMT00000374274.1	703	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
GALNT10-006	OTTHUMT00000374273.1	600	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
GALNT10-008	OTTHUMT00000374275.1	545	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
GALNT10-010	OTTHUMT00000374277.1	329	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
GALNT10-002	OTTHUMT00000374248.1	3149	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 5,961 bps Translation length: 603 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4325

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 22/11/2005)

Alternative symbols

AC008625.1-001

Other assemblies

This transcript maps to 154,190,730-154,420,984 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000297107

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: GALNT10-001 OTTHUMT00000252453.1

Summary

Transcript-based displays