Description
INO80 homolog (S. cerevisiae)
Location
Chromosome 15: 40,975,691-40,987,937 reverse strand.
About this transcript
This transcript has 6 exons.
Gene
This transcript is a product of gene OTTHUMG00000130209 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| INO80-001 | OTTHUMT00000252527.2 | 6439 | 1556aa | OTTHUMP00000160712 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10071 | A0A024R9R7 | |
| INO80-003 | OTTHUMT00000418874.1 | 5122 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| INO80-002 | OTTHUMT00000418863.1 | 5503 | 1104aa | OTTHUMP00000248573 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YMN5 | |
| INO80-006 | OTTHUMT00000418879.1 | 599 | 27aa | OTTHUMP00000248577 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| INO80-005 | OTTHUMT00000418880.1 | 566 | 79aa | OTTHUMP00000248578 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YNL3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| INO80-007 | OTTHUMT00000418878.1 | 493 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| INO80-010 | OTTHUMT00000418875.1 | 888 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| INO80-009 | OTTHUMT00000418876.1 | 580 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| INO80-008 | OTTHUMT00000418877.1 | 542 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| INO80-004 | OTTHUMT00000418881.1 | 402 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
