Transcript: LIFR-007 OTTHUMT00000367354.1

Description

leukemia inhibitory factor receptor alpha

Location

Chromosome 5: 38,485,937-38,502,675 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000131138 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LIFR-001	OTTHUMT00000253823.1	10089	1097aa	OTTHUMP00000161786	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3927	P42702
LIFR-003	OTTHUMT00000367350.1	4253	1097aa	OTTHUMP00000221308	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3927	P42702
LIFR-004	OTTHUMT00000367351.2	760	125aa	OTTHUMP00000221309	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LIFR-005	OTTHUMT00000367352.2	574	74aa	OTTHUMP00000221310	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LIFR-007	OTTHUMT00000367354.1	757	66aa	OTTHUMP00000221311	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LIFR-002	OTTHUMT00000367349.1	2371	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LIFR-009	OTTHUMT00000367356.1	523	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LIFR-006	OTTHUMT00000367353.1	581	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LIFR-008	OTTHUMT00000367355.1	552	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 757 bps Translation length: 66 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 16/10/2009)

Alternative symbols

AC010338.1-007

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 38,485,937-38,502,675 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000506003

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LIFR-007 OTTHUMT00000367354.1

Summary

Transcript-based displays