Transcript: C5orf34-005 OTTHUMT00000368013.2

Description

chromosome 5 open reading frame 34

Location

About this transcript

This transcript has 4 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
C5orf34-001	OTTHUMT00000253843.2	2507	638aa	OTTHUMP00000161802	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS3946
C5orf34-004	OTTHUMT00000368012.3	962	228aa	OTTHUMP00000221634	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
C5orf34-005	OTTHUMT00000368013.2	511	126aa	OTTHUMP00000221635	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
C5orf34-002	OTTHUMT00000368010.2	1208	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
C5orf34-003	OTTHUMT00000368011.2	833	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 4 Transcript length: 511 bps Translation length: 126 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 23/10/2009)

Alternative symbols

AC025457.3-005

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 43,493,549-43,506,006 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000503655

Curation Method

Manual annotation from Havana